Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902239.1_cds_XP_016452248.1_46507
CDS Infomation

[gene=LOC107776827] [db_xref=GeneID:107776827] [protein=DNA cross-link repair protein SNM1-like] [protein_id=XP_016452248.1] [location=join(66457..66853,67710..67890,68035..68274,68358..68502,68905..69039,69113..69179,69278..69355,69508..69560,69716..69814)] [gbkey=CDS]
Sequence

ATGGAGAAGTGCAAGGAGGGGCGAAAGCTGATGAAAGAGACGGTAATAAGTGATAGTACC
TTTGATGATCTCCATTCGTATTCCGACGACGACGGCGAGAACCGTTTTCAACCCGATAAC
CTTGACGACGATGAAACAACGCACCATTTGGAATATTCAGAGCAGATATGCTCCTCCAGT
GTTAAGAAGAGGAGACTGACGCAGACGAATCTATTCCAGTTGTGGGGCCTTGAGAATCCT
GCTGACCATGGCAAGAGCAAGAACGTCACGCAGACGAATCTATTCCAGCTGTGGGGCTTT
GAGAATCCTGGAAAGAGCAAGAGCGTCCAAAAGGCCACTACTTCTCTTGCTTCCTGCAAA
AGCCAACGCGTTTGCCCCTTCTATAAGAGGATTCCGGGAACGCCCTTCACTGTTGATGCA
TTTCGCTATGGTCCAGTCAAAGGCTGCTCTGCCTATTTCCTTAGTCATTTCCATGCCGAT
CATTATATTGGCTTGACGAAAGTATGGTCACATGGCCATATCTACTGTACCAACCTGACT
GCTCGCCTAGTTAGAATCTGTCTTAATGTTAGTCCATCTTTTATCTGTCCTCTGGAATTA
GGTACTGAATACGACCTTAAAGGAATCAAAGTTACTATGCTTGATGCTAATCACTGTCCT
GGTGCTGCTCTCATTCACTTCCGTCTCCCAAATGGACAATGTTACTTGCACACTGGAGAC
TTTAGGGCTTCGAAGCTGATGCAATCATATCCACTTCTTGCAAGCCAACGTATTAATATA
CTTTACCTTGACACAACATATTGCAATCCAAAGTACAGGTTTCCTTCCAAAGAAGAAGTT
TTGAAATTTGTTGTGGGCGTCACGAGAACATATTTGAATAATTATCCAAAAACCATCGTG
GTTGTTGGTGCATACAGCATTGGAAAAGAACATGTGTATTTTGCAATTTCCAAGGCACTC
AGGGTAAAAATATATGCAAATGCTTCCAGGAGGCGCATTCTTCAGTCTTTTGGCTGGGCA
GGAATTTCTGAAAATCTGTCAACAAACAGGAAAGATACACCTTTACACATATTGCCTATA
TCATCCTTGAAATTTGAGATGCTGGAGCGTTATTTGGCATCACAAGACGGACAGTACACT
AGCATGTTGGCATTCCGACCAACAGGTTGGACTTACTCAGAGACCATTGGGGAGAATCTA
AATTTAATAAAACCCACTTCTAAAGGCAACATCACTATTTATGGAGTTCCATATAGTGAG
CATTCTAGTTTCACAGAGCTGCAGGAATTTGTGCAGTTTCTGAGGCCAGAAAAGATAATT
CCTACTGTCAATGTTGGAAATGCTGTAAATCGTGAGAAGATGCACTCGTACTTTCAGCAG
TGGCTGAAATCCTGA

Peptide Sequence

PEP ID

XP_016452248.1
PEP Infomation

PREDICTED: DNA cross-link repair protein SNM1-like [Nicotiana tabacum]
Sequence

MEKCKEGRKLMKETVISDSTFDDLHSYSDDDGENRFQPDNLDDDETTHHLEYSEQICSSS
VKKRRLTQTNLFQLWGLENPADHGKSKNVTQTNLFQLWGFENPGKSKSVQKATTSLASCK
SQRVCPFYKRIPGTPFTVDAFRYGPVKGCSAYFLSHFHADHYIGLTKVWSHGHIYCTNLT
ARLVRICLNVSPSFICPLELGTEYDLKGIKVTMLDANHCPGAALIHFRLPNGQCYLHTGD
FRASKLMQSYPLLASQRINILYLDTTYCNPKYRFPSKEEVLKFVVGVTRTYLNNYPKTIV
VVGAYSIGKEHVYFAISKALRVKIYANASRRRILQSFGWAGISENLSTNRKDTPLHILPI
SSLKFEMLERYLASQDGQYTSMLAFRPTGWTYSETIGENLNLIKPTSKGNITIYGVPYSE
HSSFTELQEFVQFLRPEKIIPTVNVGNAVNREKMHSYFQQWLKS

Transcript Sequence

Gene sequence data has not been registered.